Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
KCNN4O15554 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.07■□□□□ 0.16
KCNN4O15554 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
KCNN4O15554 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.07■□□□□ 0.16
KCNN4O15554 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.07■□□□□ 0.16
KCNN4O15554 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
KCNN4O15554 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KCNN4O15554 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
KCNN4O15554 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KCNN4O15554 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 AC074338.1-201ENST00000416825 156 ntBASIC16.06■□□□□ 0.16
KCNN4O15554 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.06■□□□□ 0.16
KCNN4O15554 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.06■□□□□ 0.16
KCNN4O15554 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.06■□□□□ 0.16
KCNN4O15554 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.06■□□□□ 0.16
KCNN4O15554 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.06■□□□□ 0.16
KCNN4O15554 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.06■□□□□ 0.16
KCNN4O15554 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.06■□□□□ 0.16
KCNN4O15554 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.06■□□□□ 0.16
KCNN4O15554 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
KCNN4O15554 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KCNN4O15554 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
KCNN4O15554 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KCNN4O15554 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KCNN4O15554 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.05■□□□□ 0.16
KCNN4O15554 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KCNN4O15554 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.05■□□□□ 0.16
KCNN4O15554 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
KCNN4O15554 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KCNN4O15554 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
KCNN4O15554 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.05■□□□□ 0.16
KCNN4O15554 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KCNN4O15554 RPL5P21-201ENST00000404620 815 ntBASIC16.05■□□□□ 0.16
KCNN4O15554 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.05■□□□□ 0.16
KCNN4O15554 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms