Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 AL136982.4-201ENST00000437689 1740 ntBASIC13.39□□□□□ -0.27
TMEM235A6NFC5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM235A6NFC5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 UNC93B7-201ENST00000509439 705 ntBASIC13.38□□□□□ -0.27
TMEM235A6NFC5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 AL161645.1-201ENST00000622716 1255 ntBASIC13.38□□□□□ -0.27
TMEM235A6NFC5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM235A6NFC5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 AC067750.1-201ENST00000608826 6545 ntBASIC13.37□□□□□ -0.27
TMEM235A6NFC5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 RPS8P6-201ENST00000426177 609 ntBASIC13.37□□□□□ -0.27
TMEM235A6NFC5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 AL049840.3-201ENST00000602669 611 ntBASIC13.37□□□□□ -0.27
TMEM235A6NFC5 SPTSSB-204ENST00000617024 1292 ntBASIC13.37□□□□□ -0.27
TMEM235A6NFC5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TMEM235A6NFC5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms