Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC023024.2-201ENST00000623561 1993 ntBASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-7A0A0A0MS04 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.08□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC027601.5-201ENST00000624065 2482 ntBASIC13.08□□□□□ -0.31
TRBV6-7A0A0A0MS04 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRBV6-7A0A0A0MS04 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRBV6-7A0A0A0MS04 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TRBV6-7A0A0A0MS04 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
TRBV6-7A0A0A0MS04 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.08□□□□□ -0.31
TRBV6-7A0A0A0MS04 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.08□□□□□ -0.31
TRBV6-7A0A0A0MS04 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 MBLAC2-202ENST00000514906 1936 ntBASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC136604.1-201ENST00000418535 575 ntBASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC079140.1-201ENST00000508039 487 ntBASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 SLC25A1P1-201ENST00000528351 927 ntBASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC084121.4-201ENST00000641598 221 ntBASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 AF228730.8-201ENST00000642140 221 ntBASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-7A0A0A0MS04 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC015656.1-201ENST00000624209 3578 ntBASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 AP3S2-216ENST00000617003 1561 ntBASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV6-7A0A0A0MS04 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms