Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 TSEN15P1-201ENST00000423257 515 ntBASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 AC025678.2-201ENST00000562061 970 ntBASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 CNN2P2-201ENST00000443536 909 ntBASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 CNN2P3-201ENST00000450201 906 ntBASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 AL136317.3-201ENST00000618497 906 ntBASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA11Q9Y5H2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 AC009090.5-201ENST00000624886 2285 ntBASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 AC109322.1-201ENST00000524499 1264 ntBASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms