Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHA4Q9UN74 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 AC007431.3-201ENST00000623221 587 ntBASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 DRD5P1-201ENST00000456605 1438 ntBASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHA4Q9UN74 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 AC023024.2-201ENST00000623561 1993 ntBASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
PCDHA4Q9UN74 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 MYCLP2-201ENST00000449268 967 ntBASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 VDAC1P7-201ENST00000462417 847 ntBASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 AC026410.3-201ENST00000514280 936 ntBASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 AC092552.1-201ENST00000547243 906 ntBASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 MIR3197-201ENST00000582241 73 ntBASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 TMEM261P1-201ENST00000604899 340 ntBASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 AC008494.3-201ENST00000606615 944 ntBASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHA4Q9UN74 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 CRB3P1-201ENST00000449338 276 ntBASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHA4Q9UN74 RPL13AP25-201ENST00000484130 612 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms