Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 FAM207CP-201ENST00000443486 507 ntBASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 BCRP1-201ENST00000444246 691 ntBASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 GNAQP1-201ENST00000444815 1067 ntBASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 FAM86LP-201ENST00000478302 853 ntBASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 SERBP1P5-201ENST00000510079 1181 ntBASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AC091951.1-201ENST00000512854 2465 ntBASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC3Q9UN70 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 WASH3P-207ENST00000560956 1394 ntBASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 TSPY16P-201ENST00000449843 468 ntBASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC3Q9UN70 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 SLC7A15P-201ENST00000424028 1363 ntBASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms