Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CXXC1Q9P0U4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 AL645937.2-201ENST00000396808 931 ntBASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 PDIA3P2-201ENST00000428073 158 ntBASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 RN7SL181P-201ENST00000462921 277 ntBASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 AC019193.1-201ENST00000506678 823 ntBASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 MIR4783-201ENST00000580343 82 ntBASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CXXC1Q9P0U4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 GHSR-202ENST00000427970 912 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 AC006335.1-201ENST00000445200 547 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 AC125604.1-201ENST00000496255 707 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 AC004066.1-201ENST00000502488 802 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 RTN3P1-201ENST00000536295 711 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 AC135983.4-201ENST00000564116 1262 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 AC004466.1-201ENST00000599515 1080 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 COX6A1P2-201ENST00000620597 330 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.5■□□□□ 0.23
CXXC1Q9P0U4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CXXC1Q9P0U4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms