Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 RNA5SP423-201ENST00000517127 109 ntBASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 MTHFR-217ENST00000641820 1569 ntBASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 AC107918.4-201ENST00000641966 3141 ntBASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 ATG10-IT1-201ENST00000396880 487 ntBASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 MTND6P24-201ENST00000440466 518 ntBASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 AC013470.4-201ENST00000619978 986 ntBASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC23.56■■□□□ 1.36
SCAF1Q9H7N4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 AC016396.2-201ENST00000562575 1417 ntBASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 DOC2GP-202ENST00000514950 1163 ntBASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 COG4-212ENST00000564653 590 ntTSL 5 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 AL139099.5-201ENST00000635274 300 ntBASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC23.55■■□□□ 1.36
SCAF1Q9H7N4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 CICP20-201ENST00000443330 2801 ntBASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 CD81-207ENST00000481687 890 ntTSL 2 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 AC093004.1-201ENST00000508850 424 ntBASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 AL583810.1-201ENST00000553344 1045 ntBASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 AC008735.3-201ENST00000596646 500 ntBASIC23.54■■□□□ 1.36
SCAF1Q9H7N4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms