Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.71□□□□□ -0.37
NKX6-2Q9C056 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 AC010654.1-201ENST00000615722 808 ntBASIC12.71□□□□□ -0.37
NKX6-2Q9C056 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX6-2Q9C056 AC130686.1-201ENST00000622936 2466 ntBASIC12.71□□□□□ -0.37
NKX6-2Q9C056 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX6-2Q9C056 SIGLEC16-201ENST00000599858 1437 ntBASIC12.71□□□□□ -0.38
NKX6-2Q9C056 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 SPDYE21P-201ENST00000413323 827 ntBASIC12.7□□□□□ -0.38
NKX6-2Q9C056 FAM8A3P-201ENST00000427218 844 ntBASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AC091167.2-201ENST00000579581 588 ntBASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 MIR4492-201ENST00000581627 80 ntBASIC12.7□□□□□ -0.38
NKX6-2Q9C056 MPDU1-223ENST00000582151 728 ntBASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms