Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 LINC02199-201ENST00000506655 2702 ntBASIC14.93□□□□□ -0.02
CMKLR1Q99788 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AL133267.1-201ENST00000398220 340 ntBASIC14.93□□□□□ -0.02
CMKLR1Q99788 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AC022137.2-201ENST00000503482 481 ntBASIC14.93□□□□□ -0.02
CMKLR1Q99788 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMKLR1Q99788 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.93□□□□□ -0.02
CMKLR1Q99788 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 MSTO2P-201ENST00000314835 1709 ntBASIC14.92□□□□□ -0.02
CMKLR1Q99788 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 MIR648-201ENST00000385046 94 ntBASIC14.92□□□□□ -0.02
CMKLR1Q99788 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 AC106760.1-201ENST00000508690 800 ntBASIC14.92□□□□□ -0.02
CMKLR1Q99788 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 AC023310.1-201ENST00000554836 735 ntBASIC14.92□□□□□ -0.02
CMKLR1Q99788 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 GPR182-203ENST00000622922 591 ntBASIC14.92□□□□□ -0.02
CMKLR1Q99788 AC020907.1-201ENST00000616460 1350 ntBASIC14.92□□□□□ -0.02
CMKLR1Q99788 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 DRD5P1-201ENST00000456605 1438 ntBASIC14.92□□□□□ -0.02
CMKLR1Q99788 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.92□□□□□ -0.02
CMKLR1Q99788 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMKLR1Q99788 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms