Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 Z97205.2-201ENST00000564697 1639 ntBASIC15.83■□□□□ 0.12
PHOX2BQ99453 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 TSPY26P-202ENST00000565928 3884 ntBASIC15.82■□□□□ 0.12
PHOX2BQ99453 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 MIR1202-201ENST00000408529 83 ntBASIC15.82■□□□□ 0.12
PHOX2BQ99453 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 NUP210P1-202ENST00000504322 710 ntBASIC15.82■□□□□ 0.12
PHOX2BQ99453 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 NPM1P43-201ENST00000558669 786 ntBASIC15.82■□□□□ 0.12
PHOX2BQ99453 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 DGAT2L7P-201ENST00000602462 744 ntBASIC15.82■□□□□ 0.12
PHOX2BQ99453 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 AP001527.2-201ENST00000614441 631 ntBASIC15.82■□□□□ 0.12
PHOX2BQ99453 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.82■□□□□ 0.12
PHOX2BQ99453 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHOX2BQ99453 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 VDAC1P7-201ENST00000462417 847 ntBASIC15.81■□□□□ 0.12
PHOX2BQ99453 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 RN7SL774P-201ENST00000577467 290 ntBASIC15.81■□□□□ 0.12
PHOX2BQ99453 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHOX2BQ99453 AC026790.2-201ENST00000606282 430 ntBASIC15.81■□□□□ 0.12
PHOX2BQ99453 AC138649.2-201ENST00000615886 705 ntBASIC15.81■□□□□ 0.12
PHOX2BQ99453 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.81■□□□□ 0.12
PHOX2BQ99453 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms