Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 ARMC10P1-201ENST00000313754 855 ntBASIC11.9□□□□□ -0.5
AP1S3Q96PC3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PCED1CP-201ENST00000419887 785 ntBASIC11.9□□□□□ -0.5
AP1S3Q96PC3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 NKAPP1-205ENST00000585790 367 ntBASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 AC004899.2-201ENST00000622993 3860 ntBASIC11.9□□□□□ -0.5
AP1S3Q96PC3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
AP1S3Q96PC3 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
AP1S3Q96PC3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.9□□□□□ -0.51
AP1S3Q96PC3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AC092919.2-201ENST00000623631 1645 ntBASIC11.89□□□□□ -0.51
AP1S3Q96PC3 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AC132008.2-207ENST00000454517 770 ntBASIC11.89□□□□□ -0.51
AP1S3Q96PC3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AC069148.1-201ENST00000608741 768 ntBASIC11.89□□□□□ -0.51
AP1S3Q96PC3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AC004706.3-202ENST00000621574 984 ntBASIC11.89□□□□□ -0.51
AP1S3Q96PC3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.89□□□□□ -0.51
AP1S3Q96PC3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms