Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 AC055876.3-201ENST00000431496 288 ntBASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 AC138649.4-201ENST00000612222 287 ntBASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 MEIS3P1-201ENST00000495167 958 ntBASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDLIM5Q96HC4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 AC004890.2-204ENST00000481968 304 ntBASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 AL391069.4-201ENST00000609583 481 ntBASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDLIM5Q96HC4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms