Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.44□□□□□ -0.1
HPS1Q92902 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 AC027601.5-201ENST00000624065 2482 ntBASIC14.44□□□□□ -0.1
HPS1Q92902 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.44□□□□□ -0.1
HPS1Q92902 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
HPS1Q92902 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
HPS1Q92902 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 BEND3P1-201ENST00000421591 1944 ntBASIC14.43□□□□□ -0.1
HPS1Q92902 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.43□□□□□ -0.1
HPS1Q92902 AL139385.1-201ENST00000611744 3272 ntBASIC14.43□□□□□ -0.1
HPS1Q92902 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HPS1Q92902 DNAJB3-202ENST00000449667 1266 ntBASIC14.43□□□□□ -0.1
HPS1Q92902 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.43□□□□□ -0.1
HPS1Q92902 AC004790.2-201ENST00000623588 572 ntBASIC14.43□□□□□ -0.1
HPS1Q92902 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.43□□□□□ -0.1
HPS1Q92902 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
HPS1Q92902 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.43□□□□□ -0.1
HPS1Q92902 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HPS1Q92902 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
HPS1Q92902 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 AC099521.3-201ENST00000624251 2938 ntBASIC14.42□□□□□ -0.1
HPS1Q92902 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.42□□□□□ -0.1
HPS1Q92902 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.42□□□□□ -0.1
HPS1Q92902 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HPS1Q92902 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.42□□□□□ -0.1
HPS1Q92902 AC067750.1-201ENST00000608826 6545 ntBASIC14.42□□□□□ -0.1
HPS1Q92902 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.42□□□□□ -0.1
HPS1Q92902 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.42□□□□□ -0.1
HPS1Q92902 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HPS1Q92902 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HPS1Q92902 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HPS1Q92902 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.42□□□□□ -0.1
HPS1Q92902 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.42□□□□□ -0.1
HPS1Q92902 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.42□□□□□ -0.1
HPS1Q92902 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.42□□□□□ -0.1
HPS1Q92902 RN7SL440P-201ENST00000577855 343 ntBASIC14.42□□□□□ -0.1
HPS1Q92902 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
HPS1Q92902 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC14.42□□□□□ -0.1
HPS1Q92902 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HPS1Q92902 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
HPS1Q92902 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HPS1Q92902 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms