Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRFBP1Q8NEF9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 AC099063.4-201ENST00000641099 1602 ntBASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 AC092337.1-201ENST00000568699 1129 ntBASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.93□□□□□ -0.02
SRFBP1Q8NEF9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 KRT18P43-201ENST00000469825 1281 ntBASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 AC015910.1-201ENST00000579400 975 ntBASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 LINC01115-203ENST00000606068 577 ntBASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 AC004461.2-201ENST00000629517 803 ntBASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms