Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COLGALT1Q8NBJ5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 CICP6-201ENST00000457191 2729 ntBASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 AP001582.1-201ENST00000525856 295 ntBASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 DUX4L45-201ENST00000566406 1057 ntBASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 AC243960.2-201ENST00000600996 747 ntBASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 AC008687.7-202ENST00000637404 953 ntBASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COLGALT1Q8NBJ5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COLGALT1Q8NBJ5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COLGALT1Q8NBJ5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 AC010491.1-201ENST00000563101 2797 ntBASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 CNN2P8-201ENST00000421872 913 ntBASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.76■□□□□ 0.27
COLGALT1Q8NBJ5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms