Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC004987.2-201ENST00000395959 1148 ntBASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AZGP1P1-201ENST00000411909 902 ntBASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 SPDYE17-201ENST00000412399 783 ntBASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC023310.3-201ENST00000557027 670 ntBASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC100756.1-201ENST00000562736 682 ntBASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC138749.3-201ENST00000567691 622 ntBASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC116165.1-201ENST00000611806 668 ntBASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC33Q8N5R6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 PPT1-215ENST00000641471 2368 ntBASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 MYCLP2-201ENST00000449268 967 ntBASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 AC055876.2-201ENST00000531834 546 ntBASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 MIR4313-201ENST00000580760 101 ntBASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 KRT8P37-201ENST00000451609 1420 ntBASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC33Q8N5R6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC33Q8N5R6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC33Q8N5R6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC33Q8N5R6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC33Q8N5R6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC33Q8N5R6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms