Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 AL132655.2-201ENST00000596276 594 ntBASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 AC092384.3-202ENST00000564646 2873 ntBASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 AC084364.1-201ENST00000551967 1556 ntBASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AC112693.3-201ENST00000624819 1983 ntBASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 MEP1AP4-201ENST00000423244 1087 ntBASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 RN7SL399P-201ENST00000471648 279 ntBASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AC093004.1-201ENST00000508850 424 ntBASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AC027307.3-201ENST00000594262 1100 ntBASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 MIR8072-201ENST00000614241 80 ntBASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCUBE3Q8IX30 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 C18orf15-201ENST00000623680 2534 ntBASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LINC00554-201ENST00000564841 3011 ntBASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms