Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 AC126365.1-201ENST00000578585 1514 ntBASIC16.28■□□□□ 0.2
RFX6Q8HWS3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 TCAF2P1-201ENST00000291129 2421 ntBASIC16.28■□□□□ 0.2
RFX6Q8HWS3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 AC023024.2-201ENST00000623561 1993 ntBASIC16.27■□□□□ 0.2
RFX6Q8HWS3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 AC068418.2-201ENST00000577309 3703 ntBASIC16.27■□□□□ 0.2
RFX6Q8HWS3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 SERBP1P3-201ENST00000459980 809 ntBASIC16.27■□□□□ 0.2
RFX6Q8HWS3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX6Q8HWS3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 AC097376.2-205ENST00000610159 5334 ntBASIC16.27■□□□□ 0.19
RFX6Q8HWS3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.27■□□□□ 0.19
RFX6Q8HWS3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RFX6Q8HWS3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 MST1L-201ENST00000442552 2185 ntBASIC16.26■□□□□ 0.19
RFX6Q8HWS3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 MIR1233-2-201ENST00000408138 82 ntBASIC16.26■□□□□ 0.19
RFX6Q8HWS3 MIR1233-1-201ENST00000408722 82 ntBASIC16.26■□□□□ 0.19
RFX6Q8HWS3 AL080243.2-201ENST00000418783 582 ntBASIC16.26■□□□□ 0.19
RFX6Q8HWS3 TSEN15P1-201ENST00000423257 515 ntBASIC16.26■□□□□ 0.19
RFX6Q8HWS3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 LINC02228-204ENST00000642115 2962 ntBASIC16.26■□□□□ 0.19
RFX6Q8HWS3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX6Q8HWS3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms