Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 RPL7P3-201ENST00000441388 714 ntBASIC17.36■□□□□ 0.37
TRIM50Q86XT4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM50Q86XT4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AC022137.2-201ENST00000503482 481 ntBASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AC093813.1-201ENST00000605066 256 ntBASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 PRAL-201ENST00000624952 3286 ntBASIC17.35■□□□□ 0.37
TRIM50Q86XT4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM50Q86XT4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms