Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 PAUPAR-201ENST00000630360 2965 ntBASIC10.62□□□□□ -0.71
CSMD3Q7Z407 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 CLUHP2-201ENST00000426660 1303 ntBASIC10.62□□□□□ -0.71
CSMD3Q7Z407 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 PGAM1P5-201ENST00000548011 764 ntBASIC10.62□□□□□ -0.71
CSMD3Q7Z407 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.62□□□□□ -0.71
CSMD3Q7Z407 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 SOD2-202ENST00000367054 815 ntTSL 2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AL133466.1-201ENST00000447582 150 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 DGAT2L7P-201ENST00000602462 744 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 NAGK-204ENST00000443872 878 ntTSL 3 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC005740.2-201ENST00000511085 419 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AP002803.1-201ENST00000528836 498 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC027139.1-201ENST00000565286 951 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 NAT9-211ENST00000580632 799 ntTSL 3 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC005324.6-201ENST00000587972 613 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC090164.2-201ENST00000611487 516 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AL023803.2-201ENST00000620080 638 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 Z98259.2-201ENST00000641583 609 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 AC020910.5-201ENST00000623668 1865 ntBASIC10.61□□□□□ -0.71
CSMD3Q7Z407 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC10.61□□□□□ -0.71
CSMD3Q7Z407 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms