Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 SPDYE19P-201ENST00000338590 713 ntBASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 AC087499.6-201ENST00000411576 835 ntBASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 AC015922.1-201ENST00000421102 1152 ntBASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 AL353779.1-201ENST00000434793 351 ntBASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 MEIS3P1-201ENST00000495167 958 ntBASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 AC055876.2-201ENST00000531834 546 ntBASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 AC190387.1-201ENST00000551683 408 ntBASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 CRB3P1-201ENST00000449338 276 ntBASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 TPRX2P-201ENST00000535362 881 ntBASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 RRP7BP-205ENST00000566851 833 ntBASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 AC027307.3-201ENST00000594262 1100 ntBASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 AL132655.2-201ENST00000596276 594 ntBASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 LINC02084-201ENST00000606069 1096 ntBASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 AC099568.2-201ENST00000609194 695 ntBASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC39BQ5VTQ0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms