Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 HLA-DPA2-205ENST00000433582 733 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 BRI3P1-201ENST00000440440 378 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 AP003398.1-201ENST00000531124 318 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 AC106820.3-201ENST00000561653 397 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 AC103810.10-201ENST00000606504 343 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 AC107464.3-201ENST00000609172 737 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AC092638.2-201ENST00000441105 947 ntBASIC13.28□□□□□ -0.28
LRRK2Q5S007 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AC022188.1-201ENST00000620960 1664 ntBASIC13.28□□□□□ -0.28
LRRK2Q5S007 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AL158070.2-201ENST00000623713 1621 ntBASIC13.28□□□□□ -0.28
LRRK2Q5S007 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRK2Q5S007 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRK2Q5S007 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
LRRK2Q5S007 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LRRK2Q5S007 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.27□□□□□ -0.28
LRRK2Q5S007 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
LRRK2Q5S007 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRK2Q5S007 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRK2Q5S007 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LRRK2Q5S007 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms