Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 FAM86MP-201ENST00000340703 885 ntBASIC21.04■□□□□ 0.96
CGNL1Q0VF96 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.04■□□□□ 0.96
CGNL1Q0VF96 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 F11R-206ENST00000621309 4770 ntTSL 5 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 AC090616.6-203ENST00000579186 1945 ntBASIC21.03■□□□□ 0.96
CGNL1Q0VF96 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC21.03■□□□□ 0.96
CGNL1Q0VF96 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 KRT18P25-201ENST00000508931 1278 ntBASIC21.03■□□□□ 0.96
CGNL1Q0VF96 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC21.03■□□□□ 0.96
CGNL1Q0VF96 STK33-217ENST00000534493 1895 ntTSL 2 BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.02■□□□□ 0.96
CGNL1Q0VF96 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 RNU1-114P-201ENST00000365297 166 ntBASIC21.02■□□□□ 0.95
CGNL1Q0VF96 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 FTH1P14-201ENST00000482930 551 ntBASIC21.02■□□□□ 0.95
CGNL1Q0VF96 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 PRSS30P-206ENST00000641773 873 ntBASIC21.02■□□□□ 0.95
CGNL1Q0VF96 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CGNL1Q0VF96 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 WARS-232ENST00000556645 2508 ntTSL 5 BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 KLF2P4-201ENST00000451959 1225 ntBASIC21.01■□□□□ 0.95
CGNL1Q0VF96 CTBP2P5-201ENST00000454986 1264 ntBASIC21.01■□□□□ 0.95
CGNL1Q0VF96 AC004066.1-201ENST00000502488 802 ntBASIC21.01■□□□□ 0.95
CGNL1Q0VF96 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 AL583810.1-201ENST00000553344 1045 ntBASIC21.01■□□□□ 0.95
CGNL1Q0VF96 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms