Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SEC61A1P61619 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SEC61A1P61619 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
SEC61A1P61619 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.77□□□□□ -0.21
SEC61A1P61619 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.77□□□□□ -0.21
SEC61A1P61619 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SEC61A1P61619 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 RBPMS2P1-201ENST00000437762 623 ntBASIC13.77□□□□□ -0.21
SEC61A1P61619 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 SLC25A39P2-201ENST00000537614 270 ntBASIC13.77□□□□□ -0.21
SEC61A1P61619 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
SEC61A1P61619 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.77□□□□□ -0.21
SEC61A1P61619 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.77□□□□□ -0.21
SEC61A1P61619 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.77□□□□□ -0.21
SEC61A1P61619 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.77□□□□□ -0.21
SEC61A1P61619 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC61A1P61619 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.77□□□□□ -0.21
SEC61A1P61619 Z92544.3-201ENST00000624747 417 ntBASIC13.77□□□□□ -0.21
SEC61A1P61619 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SEC61A1P61619 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SEC61A1P61619 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SEC61A1P61619 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC61A1P61619 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
SEC61A1P61619 LINC00552-201ENST00000625151 2579 ntBASIC13.77□□□□□ -0.21
SEC61A1P61619 AC005840.4-201ENST00000541242 2494 ntBASIC13.76□□□□□ -0.21
SEC61A1P61619 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SEC61A1P61619 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.76□□□□□ -0.21
SEC61A1P61619 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SEC61A1P61619 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SEC61A1P61619 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.76□□□□□ -0.21
SEC61A1P61619 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.76□□□□□ -0.21
SEC61A1P61619 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.76□□□□□ -0.21
SEC61A1P61619 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.76□□□□□ -0.21
SEC61A1P61619 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.76□□□□□ -0.21
SEC61A1P61619 AP000842.3-202ENST00000569238 1080 ntBASIC13.76□□□□□ -0.21
SEC61A1P61619 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.76□□□□□ -0.21
SEC61A1P61619 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms