Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM11AP58511 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMIM11AP58511 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.45□□□□□ -0.1
SMIM11AP58511 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM11AP58511 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SMIM11AP58511 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SMIM11AP58511 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 AL591424.1-201ENST00000442569 1213 ntBASIC14.44□□□□□ -0.1
SMIM11AP58511 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.44□□□□□ -0.1
SMIM11AP58511 RPL13AP23-201ENST00000480739 586 ntBASIC14.44□□□□□ -0.1
SMIM11AP58511 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.44□□□□□ -0.1
SMIM11AP58511 AP000842.3-202ENST00000569238 1080 ntBASIC14.44□□□□□ -0.1
SMIM11AP58511 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM11AP58511 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SMIM11AP58511 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 ZNF259P1-201ENST00000407656 1365 ntBASIC14.44□□□□□ -0.1
SMIM11AP58511 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SMIM11AP58511 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMIM11AP58511 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMIM11AP58511 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11AP58511 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 AC005089.1-201ENST00000619486 2241 ntBASIC14.43□□□□□ -0.1
SMIM11AP58511 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SMIM11AP58511 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11AP58511 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11AP58511 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11AP58511 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SMIM11AP58511 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11AP58511 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 SPDYE11-202ENST00000450699 704 ntBASIC14.43□□□□□ -0.1
SMIM11AP58511 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11AP58511 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.43□□□□□ -0.1
SMIM11AP58511 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.43□□□□□ -0.1
SMIM11AP58511 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.43□□□□□ -0.1
SMIM11AP58511 SPDYE9P-201ENST00000570642 692 ntBASIC14.43□□□□□ -0.1
SMIM11AP58511 SPDYE10P-202ENST00000612005 668 ntBASIC14.43□□□□□ -0.1
SMIM11AP58511 SPDYE8P-202ENST00000612377 668 ntBASIC14.43□□□□□ -0.1
SMIM11AP58511 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SMIM11AP58511 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms