Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RIPPLY3P57055 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
RIPPLY3P57055 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.03□□□□□ -0.32
RIPPLY3P57055 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
RIPPLY3P57055 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RIPPLY3P57055 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
RIPPLY3P57055 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.02□□□□□ -0.32
RIPPLY3P57055 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.02□□□□□ -0.32
RIPPLY3P57055 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RIPPLY3P57055 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RIPPLY3P57055 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.02□□□□□ -0.32
RIPPLY3P57055 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RIPPLY3P57055 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RIPPLY3P57055 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RIPPLY3P57055 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.02□□□□□ -0.32
RIPPLY3P57055 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RIPPLY3P57055 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RIPPLY3P57055 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RIPPLY3P57055 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RIPPLY3P57055 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 AC006001.1-201ENST00000325130 474 ntBASIC13.02□□□□□ -0.33
RIPPLY3P57055 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 AC100757.4-201ENST00000626934 759 ntBASIC13.02□□□□□ -0.33
RIPPLY3P57055 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 AC018735.1-201ENST00000437208 1502 ntBASIC13.02□□□□□ -0.33
RIPPLY3P57055 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RIPPLY3P57055 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RIPPLY3P57055 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 AC007326.2-201ENST00000624224 7579 ntBASIC13.01□□□□□ -0.33
RIPPLY3P57055 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 UROS-201ENST00000368774 744 ntTSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 AC134915.1-201ENST00000426461 574 ntBASIC13.01□□□□□ -0.33
RIPPLY3P57055 RPL7P35-201ENST00000446943 740 ntBASIC13.01□□□□□ -0.33
RIPPLY3P57055 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 AP001063.1-201ENST00000568332 529 ntBASIC13.01□□□□□ -0.33
RIPPLY3P57055 RN7SL774P-201ENST00000577467 290 ntBASIC13.01□□□□□ -0.33
RIPPLY3P57055 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 PPY2P-201ENST00000582808 702 ntBASIC13.01□□□□□ -0.33
RIPPLY3P57055 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 BRI3BPP1-201ENST00000594224 787 ntBASIC13.01□□□□□ -0.33
RIPPLY3P57055 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RIPPLY3P57055 AC108860.2-201ENST00000562760 2183 ntBASIC13.01□□□□□ -0.33
RIPPLY3P57055 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RIPPLY3P57055 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms