Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 AC087481.3-201ENST00000602886 1894 ntBASIC13.65□□□□□ -0.22
FOXG1P55316 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.65□□□□□ -0.22
FOXG1P55316 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
FOXG1P55316 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
FOXG1P55316 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
FOXG1P55316 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.64□□□□□ -0.23
FOXG1P55316 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.64□□□□□ -0.23
FOXG1P55316 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.64□□□□□ -0.23
FOXG1P55316 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
FOXG1P55316 AC098614.1-201ENST00000368528 745 ntBASIC13.64□□□□□ -0.23
FOXG1P55316 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.64□□□□□ -0.23
FOXG1P55316 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 TMEM14DP-201ENST00000422205 345 ntBASIC13.64□□□□□ -0.23
FOXG1P55316 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 GAPDHP40-201ENST00000505218 1006 ntBASIC13.64□□□□□ -0.23
FOXG1P55316 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
FOXG1P55316 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.64□□□□□ -0.23
FOXG1P55316 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.64□□□□□ -0.23
FOXG1P55316 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 CICP11-201ENST00000434745 2827 ntBASIC13.64□□□□□ -0.23
FOXG1P55316 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.64□□□□□ -0.23
FOXG1P55316 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 PPT1-215ENST00000641471 2368 ntBASIC13.64□□□□□ -0.23
FOXG1P55316 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
FOXG1P55316 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.64□□□□□ -0.23
FOXG1P55316 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FOXG1P55316 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 AC073347.1-201ENST00000421633 2643 ntBASIC13.63□□□□□ -0.23
FOXG1P55316 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
FOXG1P55316 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.63□□□□□ -0.23
FOXG1P55316 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.63□□□□□ -0.23
FOXG1P55316 GAPDHP21-201ENST00000450301 1010 ntBASIC13.63□□□□□ -0.23
FOXG1P55316 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.63□□□□□ -0.23
FOXG1P55316 AC026410.3-201ENST00000514280 936 ntBASIC13.63□□□□□ -0.23
FOXG1P55316 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms