Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 KRT126P-201ENST00000549467 1181 ntBASIC14.24□□□□□ -0.13
HMGA2P52926 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HMGA2P52926 AC140113.2-201ENST00000604370 208 ntBASIC14.24□□□□□ -0.13
HMGA2P52926 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HMGA2P52926 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
HMGA2P52926 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMGA2P52926 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.24□□□□□ -0.13
HMGA2P52926 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.24□□□□□ -0.13
HMGA2P52926 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HMGA2P52926 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 HSPA7-201ENST00000445535 1927 ntBASIC14.23□□□□□ -0.13
HMGA2P52926 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 MTHFR-210ENST00000641407 2387 ntBASIC14.23□□□□□ -0.13
HMGA2P52926 AC018442.1-201ENST00000421439 2061 ntBASIC14.23□□□□□ -0.13
HMGA2P52926 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HMGA2P52926 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HMGA2P52926 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 AL353705.2-201ENST00000428243 662 ntBASIC14.23□□□□□ -0.13
HMGA2P52926 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGA2P52926 AC015910.1-201ENST00000579400 975 ntBASIC14.23□□□□□ -0.13
HMGA2P52926 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.23□□□□□ -0.13
HMGA2P52926 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 UXT-AS1-201ENST00000590504 1525 ntBASIC14.23□□□□□ -0.13
HMGA2P52926 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMGA2P52926 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGA2P52926 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGA2P52926 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
HMGA2P52926 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGA2P52926 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGA2P52926 KRT8P12-202ENST00000472924 1397 ntBASIC14.22□□□□□ -0.13
HMGA2P52926 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.22□□□□□ -0.13
HMGA2P52926 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGA2P52926 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.22□□□□□ -0.13
HMGA2P52926 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 MCCD1P2-201ENST00000423228 335 ntBASIC14.22□□□□□ -0.13
HMGA2P52926 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HMGA2P52926 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGA2P52926 AL592309.1-201ENST00000443127 649 ntBASIC14.22□□□□□ -0.13
HMGA2P52926 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGA2P52926 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms