Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLCN4P51793 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 AC015818.8-201ENST00000587907 1519 ntBASIC16.31■□□□□ 0.2
CLCN4P51793 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLCN4P51793 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN4P51793 AC114812.1-204ENST00000449669 728 ntBASIC16.31■□□□□ 0.2
CLCN4P51793 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.31■□□□□ 0.2
CLCN4P51793 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN4P51793 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN4P51793 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.31■□□□□ 0.2
CLCN4P51793 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
CLCN4P51793 AP006547.1-201ENST00000563435 692 ntBASIC16.31■□□□□ 0.2
CLCN4P51793 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 ECM1P1-201ENST00000604092 1279 ntBASIC16.31■□□□□ 0.2
CLCN4P51793 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN4P51793 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN4P51793 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN4P51793 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN4P51793 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 AC018695.7-201ENST00000624587 2492 ntBASIC16.3■□□□□ 0.2
CLCN4P51793 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN4P51793 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN4P51793 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN4P51793 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CLCN4P51793 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN4P51793 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN4P51793 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 RN7SL48P-201ENST00000579283 293 ntBASIC16.3■□□□□ 0.2
CLCN4P51793 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN4P51793 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLCN4P51793 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN4P51793 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN4P51793 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 AC079328.2-201ENST00000561241 3354 ntBASIC16.29■□□□□ 0.2
CLCN4P51793 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLCN4P51793 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 AC148477.4-201ENST00000613430 1793 ntBASIC16.29■□□□□ 0.2
CLCN4P51793 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms