Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC1A6P48664 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC1A6P48664 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC1A6P48664 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC1A6P48664 AC142381.1-201ENST00000426099 345 ntBASIC15.4■□□□□ 0.06
SLC1A6P48664 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC1A6P48664 KRT18P2-201ENST00000447938 1258 ntBASIC15.4■□□□□ 0.06
SLC1A6P48664 RNA5SP419-201ENST00000515908 135 ntBASIC15.4■□□□□ 0.06
SLC1A6P48664 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC1A6P48664 AC008267.7-201ENST00000624570 1194 ntBASIC15.4■□□□□ 0.06
SLC1A6P48664 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
SLC1A6P48664 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 CICP4-201ENST00000447359 2812 ntBASIC15.4■□□□□ 0.06
SLC1A6P48664 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC1A6P48664 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC1A6P48664 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC1A6P48664 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.4■□□□□ 0.06
SLC1A6P48664 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC1A6P48664 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A6P48664 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC1A6P48664 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC1A6P48664 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A6P48664 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A6P48664 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A6P48664 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC1A6P48664 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC1A6P48664 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC1A6P48664 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A6P48664 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC1A6P48664 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC1A6P48664 PDPK2P-202ENST00000562415 1191 ntBASIC15.39■□□□□ 0.05
SLC1A6P48664 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 AP001005.1-201ENST00000571755 1248 ntBASIC15.39■□□□□ 0.05
SLC1A6P48664 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC1A6P48664 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC1A6P48664 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A6P48664 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 AC117489.1-201ENST00000625169 3217 ntBASIC15.39■□□□□ 0.05
SLC1A6P48664 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A6P48664 AKAP8P1-201ENST00000434743 1349 ntBASIC15.39■□□□□ 0.05
SLC1A6P48664 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A6P48664 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
SLC1A6P48664 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC1A6P48664 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SLC1A6P48664 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
SLC1A6P48664 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
SLC1A6P48664 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC1A6P48664 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SLC1A6P48664 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC1A6P48664 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC1A6P48664 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A6P48664 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A6P48664 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC1A6P48664 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SLC1A6P48664 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.38■□□□□ 0.05
SLC1A6P48664 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC1A6P48664 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A6P48664 AC104692.2-201ENST00000603054 253 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms