Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.82□□□□□ -0.2
SOX2P48431 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.82□□□□□ -0.2
SOX2P48431 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.82□□□□□ -0.2
SOX2P48431 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.82□□□□□ -0.2
SOX2P48431 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.82□□□□□ -0.2
SOX2P48431 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 AC232323.1-201ENST00000540724 2099 ntBASIC13.82□□□□□ -0.2
SOX2P48431 REXO1L5P-201ENST00000622260 2098 ntBASIC13.82□□□□□ -0.2
SOX2P48431 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 AC117489.1-201ENST00000625169 3217 ntBASIC13.82□□□□□ -0.2
SOX2P48431 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SOX2P48431 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.82□□□□□ -0.2
SOX2P48431 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 AC005089.1-201ENST00000619486 2241 ntBASIC13.82□□□□□ -0.2
SOX2P48431 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.82□□□□□ -0.2
SOX2P48431 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SOX2P48431 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SOX2P48431 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SOX2P48431 AL136982.4-201ENST00000437689 1740 ntBASIC13.81□□□□□ -0.2
SOX2P48431 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SOX2P48431 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SOX2P48431 AC002056.1-201ENST00000395613 760 ntBASIC13.81□□□□□ -0.2
SOX2P48431 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 AL645939.2-201ENST00000427340 991 ntBASIC13.81□□□□□ -0.2
SOX2P48431 AC007967.2-201ENST00000432613 625 ntBASIC13.81□□□□□ -0.2
SOX2P48431 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 RNA5SP410-201ENST00000516285 106 ntBASIC13.81□□□□□ -0.2
SOX2P48431 AC105233.2-201ENST00000523697 349 ntBASIC13.81□□□□□ -0.2
SOX2P48431 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 AF228730.5-201ENST00000530288 346 ntBASIC13.81□□□□□ -0.2
SOX2P48431 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.81□□□□□ -0.2
SOX2P48431 AC073389.1-201ENST00000595595 795 ntBASIC13.81□□□□□ -0.2
SOX2P48431 AL450472.2-201ENST00000603663 1156 ntBASIC13.81□□□□□ -0.2
SOX2P48431 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.81□□□□□ -0.2
SOX2P48431 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SOX2P48431 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.81□□□□□ -0.2
SOX2P48431 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.81□□□□□ -0.2
SOX2P48431 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
SOX2P48431 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
SOX2P48431 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SOX2P48431 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SOX2P48431 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.8□□□□□ -0.2
SOX2P48431 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SOX2P48431 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SOX2P48431 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.8□□□□□ -0.2
SOX2P48431 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SOX2P48431 FOXO1B-201ENST00000504678 1527 ntBASIC13.8□□□□□ -0.2
SOX2P48431 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SOX2P48431 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SOX2P48431 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SOX2P48431 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SOX2P48431 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SOX2P48431 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SOX2P48431 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SOX2P48431 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SOX2P48431 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms