Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.06■□□□□ 0.32
HTTP42858 AC244394.1-201ENST00000435000 1665 ntBASIC17.06■□□□□ 0.32
HTTP42858 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.06■□□□□ 0.32
HTTP42858 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.06■□□□□ 0.32
HTTP42858 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.06■□□□□ 0.32
HTTP42858 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.06■□□□□ 0.32
HTTP42858 AC012073.1-201ENST00000606114 1108 ntBASIC17.06■□□□□ 0.32
HTTP42858 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.06■□□□□ 0.32
HTTP42858 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 AC006449.5-201ENST00000610658 2098 ntBASIC17.06■□□□□ 0.32
HTTP42858 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.06■□□□□ 0.32
HTTP42858 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.06■□□□□ 0.32
HTTP42858 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.06■□□□□ 0.32
HTTP42858 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HTTP42858 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.06■□□□□ 0.32
HTTP42858 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.06■□□□□ 0.32
HTTP42858 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.06■□□□□ 0.32
HTTP42858 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.06■□□□□ 0.32
HTTP42858 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HTTP42858 MRPL22P1-201ENST00000505398 616 ntBASIC17.06■□□□□ 0.32
HTTP42858 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.06■□□□□ 0.32
HTTP42858 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HTTP42858 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.06■□□□□ 0.32
HTTP42858 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 AC138696.2-201ENST00000607376 223 ntBASIC17.06■□□□□ 0.32
HTTP42858 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HTTP42858 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.06■□□□□ 0.32
HTTP42858 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTTP42858 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTTP42858 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.05■□□□□ 0.32
HTTP42858 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.05■□□□□ 0.32
HTTP42858 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.05■□□□□ 0.32
HTTP42858 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.05■□□□□ 0.32
HTTP42858 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.05■□□□□ 0.32
HTTP42858 PHBP15-201ENST00000574228 665 ntBASIC17.05■□□□□ 0.32
HTTP42858 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.05■□□□□ 0.32
HTTP42858 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HTTP42858 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTTP42858 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.05■□□□□ 0.32
HTTP42858 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTTP42858 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTTP42858 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.05■□□□□ 0.32
HTTP42858 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.05■□□□□ 0.32
HTTP42858 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 AC008805.1-201ENST00000590892 364 ntBASIC17.05■□□□□ 0.32
HTTP42858 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.05■□□□□ 0.32
HTTP42858 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
HTTP42858 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTTP42858 RNF165-205ENST00000588679 2904 ntBASIC17.05■□□□□ 0.32
HTTP42858 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTTP42858 AC078875.1-201ENST00000431907 724 ntBASIC17.05■□□□□ 0.32
HTTP42858 POU5F1P2-201ENST00000521750 823 ntBASIC17.05■□□□□ 0.32
HTTP42858 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.05■□□□□ 0.32
HTTP42858 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.05■□□□□ 0.32
HTTP42858 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HTTP42858 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 AC090502.4-201ENST00000551714 1386 ntBASIC17.04■□□□□ 0.32
HTTP42858 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.04■□□□□ 0.32
HTTP42858 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 AL627231.1-201ENST00000394467 1125 ntBASIC17.04■□□□□ 0.32
HTTP42858 PUDPP3-201ENST00000445368 636 ntBASIC17.04■□□□□ 0.32
HTTP42858 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.04■□□□□ 0.32
HTTP42858 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.04■□□□□ 0.32
HTTP42858 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HTTP42858 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HTTP42858 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.04■□□□□ 0.32
HTTP42858 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.04■□□□□ 0.32
HTTP42858 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HTTP42858 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.04■□□□□ 0.32
HTTP42858 AC138466.5-201ENST00000624002 808 ntBASIC17.04■□□□□ 0.32
HTTP42858 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HTTP42858 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms