Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC106794.1-201ENST00000506935 792 ntBASIC19.02■□□□□ 0.64
PDE6BP35913 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.02■□□□□ 0.64
PDE6BP35913 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.02■□□□□ 0.64
PDE6BP35913 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PDE6BP35913 AC106820.3-201ENST00000561653 397 ntBASIC19.02■□□□□ 0.64
PDE6BP35913 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
PDE6BP35913 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.02■□□□□ 0.64
PDE6BP35913 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6BP35913 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.02■□□□□ 0.63
PDE6BP35913 AC022188.1-201ENST00000620960 1664 ntBASIC19.01■□□□□ 0.63
PDE6BP35913 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6BP35913 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 AL136309.1-201ENST00000403917 691 ntBASIC19.01■□□□□ 0.63
PDE6BP35913 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6BP35913 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6BP35913 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDE6BP35913 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.01■□□□□ 0.63
PDE6BP35913 NUP210P1-202ENST00000504322 710 ntBASIC19.01■□□□□ 0.63
PDE6BP35913 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.01■□□□□ 0.63
PDE6BP35913 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.01■□□□□ 0.63
PDE6BP35913 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.01■□□□□ 0.63
PDE6BP35913 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6BP35913 AC026740.1-201ENST00000607068 791 ntBASIC19.01■□□□□ 0.63
PDE6BP35913 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PDE6BP35913 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDE6BP35913 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6BP35913 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PDE6BP35913 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6BP35913 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PDE6BP35913 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6BP35913 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDE6BP35913 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 AC007274.2-201ENST00000421675 662 ntBASIC19■□□□□ 0.63
PDE6BP35913 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19■□□□□ 0.63
PDE6BP35913 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19■□□□□ 0.63
PDE6BP35913 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19■□□□□ 0.63
PDE6BP35913 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 MBP-227ENST00000526111 581 ntTSL 4 BASIC19■□□□□ 0.63
PDE6BP35913 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19■□□□□ 0.63
PDE6BP35913 AL161670.2-201ENST00000557650 1227 ntBASIC19■□□□□ 0.63
PDE6BP35913 PRKXP1-201ENST00000561423 1122 ntBASIC19■□□□□ 0.63
PDE6BP35913 AC013355.1-201ENST00000562625 723 ntBASIC19■□□□□ 0.63
PDE6BP35913 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
PDE6BP35913 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6BP35913 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19■□□□□ 0.63
PDE6BP35913 AC092978.1-202ENST00000637590 1327 ntBASIC19■□□□□ 0.63
PDE6BP35913 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19■□□□□ 0.63
PDE6BP35913 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PDE6BP35913 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.99■□□□□ 0.63
PDE6BP35913 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.99■□□□□ 0.63
PDE6BP35913 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.99■□□□□ 0.63
PDE6BP35913 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.99■□□□□ 0.63
PDE6BP35913 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms