Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 PHKG1P2-201ENST00000457537 863 ntBASIC13.91□□□□□ -0.18
HOXC12P31275 AC093004.1-201ENST00000508850 424 ntBASIC13.91□□□□□ -0.18
HOXC12P31275 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.91□□□□□ -0.18
HOXC12P31275 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
HOXC12P31275 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
HOXC12P31275 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.91□□□□□ -0.18
HOXC12P31275 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 AC008494.3-201ENST00000606615 944 ntBASIC13.91□□□□□ -0.18
HOXC12P31275 PCDHB19P-201ENST00000570871 2371 ntBASIC13.91□□□□□ -0.18
HOXC12P31275 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.9□□□□□ -0.18
HOXC12P31275 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.9□□□□□ -0.18
HOXC12P31275 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HOXC12P31275 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.9□□□□□ -0.18
HOXC12P31275 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HOXC12P31275 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.9□□□□□ -0.18
HOXC12P31275 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.9□□□□□ -0.18
HOXC12P31275 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.9□□□□□ -0.18
HOXC12P31275 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.9□□□□□ -0.18
HOXC12P31275 AC025048.3-201ENST00000590609 569 ntBASIC13.9□□□□□ -0.18
HOXC12P31275 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.9□□□□□ -0.18
HOXC12P31275 AC005702.4-201ENST00000618393 416 ntBASIC13.9□□□□□ -0.18
HOXC12P31275 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.9□□□□□ -0.18
HOXC12P31275 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.9□□□□□ -0.18
HOXC12P31275 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HOXC12P31275 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HOXC12P31275 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HOXC12P31275 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.9□□□□□ -0.18
HOXC12P31275 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HOXC12P31275 LINC02447-202ENST00000501888 2146 ntBASIC13.9□□□□□ -0.18
HOXC12P31275 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HOXC12P31275 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.9□□□□□ -0.19
HOXC12P31275 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HOXC12P31275 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.9□□□□□ -0.19
HOXC12P31275 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
HOXC12P31275 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
HOXC12P31275 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HOXC12P31275 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC12P31275 SPDYE19P-201ENST00000338590 713 ntBASIC13.89□□□□□ -0.19
HOXC12P31275 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.89□□□□□ -0.19
HOXC12P31275 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC12P31275 MEP1AP4-201ENST00000423244 1087 ntBASIC13.89□□□□□ -0.19
HOXC12P31275 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
HOXC12P31275 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.89□□□□□ -0.19
HOXC12P31275 AC114501.2-201ENST00000439631 535 ntBASIC13.89□□□□□ -0.19
HOXC12P31275 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC12P31275 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC12P31275 DOC2GP-202ENST00000514950 1163 ntBASIC13.89□□□□□ -0.19
HOXC12P31275 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC12P31275 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC12P31275 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.89□□□□□ -0.19
HOXC12P31275 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.89□□□□□ -0.19
HOXC12P31275 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.89□□□□□ -0.19
HOXC12P31275 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC12P31275 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms