Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.92□□□□□ -0.18
CD40LGP29965 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40LGP29965 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CD40LGP29965 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.92□□□□□ -0.18
CD40LGP29965 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.91□□□□□ -0.18
CD40LGP29965 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 AL139385.1-201ENST00000611744 3272 ntBASIC13.91□□□□□ -0.18
CD40LGP29965 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.91□□□□□ -0.18
CD40LGP29965 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
CD40LGP29965 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.91□□□□□ -0.18
CD40LGP29965 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.91□□□□□ -0.18
CD40LGP29965 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.91□□□□□ -0.18
CD40LGP29965 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.91□□□□□ -0.18
CD40LGP29965 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.91□□□□□ -0.18
CD40LGP29965 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
CD40LGP29965 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.91□□□□□ -0.18
CD40LGP29965 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD40LGP29965 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.91□□□□□ -0.18
CD40LGP29965 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CD40LGP29965 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CD40LGP29965 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CD40LGP29965 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CD40LGP29965 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.9□□□□□ -0.18
CD40LGP29965 PRELID1P1-202ENST00000567272 903 ntBASIC13.9□□□□□ -0.18
CD40LGP29965 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.9□□□□□ -0.18
CD40LGP29965 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.9□□□□□ -0.18
CD40LGP29965 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 AL121772.3-201ENST00000610840 674 ntBASIC13.9□□□□□ -0.18
CD40LGP29965 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 ACE3P-201ENST00000423435 1973 ntBASIC13.9□□□□□ -0.18
CD40LGP29965 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.9□□□□□ -0.18
CD40LGP29965 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CD40LGP29965 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CD40LGP29965 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD40LGP29965 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40LGP29965 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.9□□□□□ -0.19
CD40LGP29965 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms