Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN3P26045 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN3P26045 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN3P26045 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN3P26045 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN3P26045 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTPN3P26045 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN3P26045 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN3P26045 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN3P26045 AC114501.2-201ENST00000439631 535 ntBASIC15.92■□□□□ 0.14
PTPN3P26045 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.92■□□□□ 0.14
PTPN3P26045 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN3P26045 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.92■□□□□ 0.14
PTPN3P26045 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTPN3P26045 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.92■□□□□ 0.14
PTPN3P26045 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 AL121723.1-201ENST00000445194 1519 ntBASIC15.92■□□□□ 0.14
PTPN3P26045 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTPN3P26045 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 TNRC18P2-201ENST00000417666 2714 ntBASIC15.92■□□□□ 0.14
PTPN3P26045 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.92■□□□□ 0.14
PTPN3P26045 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTPN3P26045 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.92■□□□□ 0.14
PTPN3P26045 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTPN3P26045 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN3P26045 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PTPN3P26045 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN3P26045 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN3P26045 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN3P26045 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN3P26045 AC004890.2-204ENST00000481968 304 ntBASIC15.91■□□□□ 0.14
PTPN3P26045 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.91■□□□□ 0.14
PTPN3P26045 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN3P26045 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PTPN3P26045 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN3P26045 TCAF2P1-201ENST00000291129 2421 ntBASIC15.91■□□□□ 0.14
PTPN3P26045 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 CICP11-201ENST00000434745 2827 ntBASIC15.91■□□□□ 0.14
PTPN3P26045 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN3P26045 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PTPN3P26045 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PTPN3P26045 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 AC138969.3-201ENST00000546612 1459 ntBASIC15.91■□□□□ 0.14
PTPN3P26045 AC138932.2-201ENST00000548268 1459 ntBASIC15.91■□□□□ 0.14
PTPN3P26045 AC126755.4-201ENST00000549796 1459 ntBASIC15.91■□□□□ 0.14
PTPN3P26045 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN3P26045 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PTPN3P26045 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PTPN3P26045 AC068587.6-202ENST00000641839 5619 ntBASIC15.9■□□□□ 0.14
PTPN3P26045 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PTPN3P26045 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PTPN3P26045 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN3P26045 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN3P26045 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 AP002414.2-201ENST00000591780 3365 ntBASIC15.9■□□□□ 0.14
PTPN3P26045 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms