Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TNFSF4P23510 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 MRPS18AP1-201ENST00000414458 589 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 AC015922.1-201ENST00000421102 1152 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.41□□□□□ -0.26
TNFSF4P23510 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 MEIS3P1-201ENST00000495167 958 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 AC093004.1-201ENST00000508850 424 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TNFSF4P23510 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 AC104794.3-201ENST00000566840 1248 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.41□□□□□ -0.26
TNFSF4P23510 LINC02560-201ENST00000596379 459 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.41□□□□□ -0.26
TNFSF4P23510 AC008761.3-201ENST00000624803 892 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.41□□□□□ -0.26
TNFSF4P23510 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 AC010491.1-201ENST00000563101 2797 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.41□□□□□ -0.26
TNFSF4P23510 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 AC023824.1-201ENST00000562945 2975 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 AL607033.1-201ENST00000623900 1599 ntBASIC13.41□□□□□ -0.26
TNFSF4P23510 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TNFSF4P23510 AC018892.3-201ENST00000623986 2499 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 KC6-207ENST00000600644 2311 ntTSL 3 BASIC13.4□□□□□ -0.26
TNFSF4P23510 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 TCAF2P1-201ENST00000291129 2421 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.4□□□□□ -0.26
TNFSF4P23510 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 AC087499.6-201ENST00000411576 835 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.4□□□□□ -0.26
TNFSF4P23510 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.4□□□□□ -0.26
TNFSF4P23510 AC002472.2-201ENST00000442739 958 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.4□□□□□ -0.26
TNFSF4P23510 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.4□□□□□ -0.26
TNFSF4P23510 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 TPRX2P-201ENST00000535362 881 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
TNFSF4P23510 AC092337.1-201ENST00000568699 1129 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.4□□□□□ -0.26
TNFSF4P23510 MIR3197-201ENST00000582241 73 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 SRD5A3P1-201ENST00000603021 949 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 AC097359.3-201ENST00000603982 1210 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.4□□□□□ -0.26
TNFSF4P23510 AC004840.1-201ENST00000636359 365 ntBASIC13.4□□□□□ -0.26
TNFSF4P23510 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TNFSF4P23510 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms