Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PDGFRAP16234 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PDGFRAP16234 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.4■□□□□ 0.22
PDGFRAP16234 TOMM22P5-201ENST00000416399 439 ntBASIC16.4■□□□□ 0.22
PDGFRAP16234 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.4■□□□□ 0.22
PDGFRAP16234 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.4■□□□□ 0.22
PDGFRAP16234 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDGFRAP16234 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 TERF1P3-201ENST00000505638 1227 ntBASIC16.4■□□□□ 0.22
PDGFRAP16234 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.4■□□□□ 0.22
PDGFRAP16234 AC135586.1-201ENST00000539323 574 ntBASIC16.4■□□□□ 0.22
PDGFRAP16234 TIMM17BP1-201ENST00000545713 516 ntBASIC16.4■□□□□ 0.22
PDGFRAP16234 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PDGFRAP16234 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PDGFRAP16234 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.4■□□□□ 0.22
PDGFRAP16234 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.4■□□□□ 0.22
PDGFRAP16234 AC004840.1-201ENST00000636359 365 ntBASIC16.4■□□□□ 0.22
PDGFRAP16234 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDGFRAP16234 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.4■□□□□ 0.22
PDGFRAP16234 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.4■□□□□ 0.22
PDGFRAP16234 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDGFRAP16234 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 AL109954.1-202ENST00000564051 2148 ntBASIC16.4■□□□□ 0.22
PDGFRAP16234 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.4■□□□□ 0.22
PDGFRAP16234 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDGFRAP16234 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.4■□□□□ 0.22
PDGFRAP16234 DBET-201ENST00000630918 3363 ntBASIC16.4■□□□□ 0.22
PDGFRAP16234 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PDGFRAP16234 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.39■□□□□ 0.21
PDGFRAP16234 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PDGFRAP16234 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PDGFRAP16234 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.39■□□□□ 0.21
PDGFRAP16234 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.39■□□□□ 0.21
PDGFRAP16234 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
PDGFRAP16234 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.39■□□□□ 0.21
PDGFRAP16234 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.39■□□□□ 0.21
PDGFRAP16234 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PDGFRAP16234 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.39■□□□□ 0.21
PDGFRAP16234 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PDGFRAP16234 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.39■□□□□ 0.21
PDGFRAP16234 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PDGFRAP16234 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.39■□□□□ 0.21
PDGFRAP16234 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.39■□□□□ 0.21
PDGFRAP16234 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PDGFRAP16234 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDGFRAP16234 AC084364.1-201ENST00000551967 1556 ntBASIC16.38■□□□□ 0.21
PDGFRAP16234 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PDGFRAP16234 AP002414.2-201ENST00000591780 3365 ntBASIC16.38■□□□□ 0.21
PDGFRAP16234 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.38■□□□□ 0.21
PDGFRAP16234 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PDGFRAP16234 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFRAP16234 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PDGFRAP16234 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms