Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.18■□□□□ 0.18
CD48P09326 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.18■□□□□ 0.18
CD48P09326 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.18■□□□□ 0.18
CD48P09326 IGHV3-42-201ENST00000520410 361 ntBASIC16.18■□□□□ 0.18
CD48P09326 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.18■□□□□ 0.18
CD48P09326 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.18■□□□□ 0.18
CD48P09326 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.18■□□□□ 0.18
CD48P09326 AC015910.1-201ENST00000579400 975 ntBASIC16.18■□□□□ 0.18
CD48P09326 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.18■□□□□ 0.18
CD48P09326 AL390955.2-201ENST00000603032 514 ntBASIC16.18■□□□□ 0.18
CD48P09326 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.18■□□□□ 0.18
CD48P09326 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.18■□□□□ 0.18
CD48P09326 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD48P09326 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.18■□□□□ 0.18
CD48P09326 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD48P09326 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CD48P09326 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CD48P09326 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.17■□□□□ 0.18
CD48P09326 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.17■□□□□ 0.18
CD48P09326 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.17■□□□□ 0.18
CD48P09326 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.17■□□□□ 0.18
CD48P09326 AC009477.1-201ENST00000452936 217 ntBASIC16.17■□□□□ 0.18
CD48P09326 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.17■□□□□ 0.18
CD48P09326 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.17■□□□□ 0.18
CD48P09326 SDHAP3-202ENST00000515467 728 ntBASIC16.17■□□□□ 0.18
CD48P09326 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.17■□□□□ 0.18
CD48P09326 AC009407.1-201ENST00000568958 598 ntBASIC16.17■□□□□ 0.18
CD48P09326 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.17■□□□□ 0.18
CD48P09326 AC106028.4-201ENST00000614509 607 ntBASIC16.17■□□□□ 0.18
CD48P09326 AC093512.1-201ENST00000617969 520 ntBASIC16.17■□□□□ 0.18
CD48P09326 AL390754.1-201ENST00000619088 582 ntBASIC16.17■□□□□ 0.18
CD48P09326 AC004461.2-201ENST00000629517 803 ntBASIC16.17■□□□□ 0.18
CD48P09326 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CD48P09326 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CD48P09326 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD48P09326 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD48P09326 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms