Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS1P07996 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
THBS1P07996 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS1P07996 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.4□□□□□ -0.1
THBS1P07996 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS1P07996 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.4□□□□□ -0.1
THBS1P07996 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.4□□□□□ -0.1
THBS1P07996 AKR1B10P2-201ENST00000577332 927 ntBASIC14.4□□□□□ -0.1
THBS1P07996 AC011467.4-201ENST00000594891 528 ntBASIC14.4□□□□□ -0.1
THBS1P07996 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.4□□□□□ -0.1
THBS1P07996 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS1P07996 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
THBS1P07996 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS1P07996 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.4□□□□□ -0.1
THBS1P07996 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS1P07996 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
THBS1P07996 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
THBS1P07996 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
THBS1P07996 WASH3P-207ENST00000560956 1394 ntBASIC14.39□□□□□ -0.11
THBS1P07996 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.39□□□□□ -0.11
THBS1P07996 AC015922.1-201ENST00000421102 1152 ntBASIC14.39□□□□□ -0.11
THBS1P07996 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.39□□□□□ -0.11
THBS1P07996 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.39□□□□□ -0.11
THBS1P07996 AC004449.1-201ENST00000564240 433 ntBASIC14.39□□□□□ -0.11
THBS1P07996 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 TEX28P1-201ENST00000613479 1221 ntBASIC14.39□□□□□ -0.11
THBS1P07996 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.39□□□□□ -0.11
THBS1P07996 TEX28P2-201ENST00000617764 1221 ntBASIC14.39□□□□□ -0.11
THBS1P07996 SPDYE12P-201ENST00000618416 771 ntBASIC14.39□□□□□ -0.11
THBS1P07996 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
THBS1P07996 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 LINC01101-201ENST00000622953 1884 ntBASIC14.39□□□□□ -0.11
THBS1P07996 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.39□□□□□ -0.11
THBS1P07996 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.39□□□□□ -0.11
THBS1P07996 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.39□□□□□ -0.11
THBS1P07996 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THBS1P07996 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
THBS1P07996 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
THBS1P07996 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms