Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RETP07949 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 AC138028.6-201ENST00000616106 1482 ntBASIC15.74■□□□□ 0.11
RETP07949 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RETP07949 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.74■□□□□ 0.11
RETP07949 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 FXNP2-201ENST00000411625 547 ntBASIC15.74■□□□□ 0.11
RETP07949 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.74■□□□□ 0.11
RETP07949 NUS1P3-201ENST00000423502 862 ntBASIC15.74■□□□□ 0.11
RETP07949 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.74■□□□□ 0.11
RETP07949 AC106760.1-201ENST00000508690 800 ntBASIC15.74■□□□□ 0.11
RETP07949 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.74■□□□□ 0.11
RETP07949 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.74■□□□□ 0.11
RETP07949 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.74■□□□□ 0.11
RETP07949 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.74■□□□□ 0.11
RETP07949 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.74■□□□□ 0.11
RETP07949 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.74■□□□□ 0.11
RETP07949 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.74■□□□□ 0.11
RETP07949 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.74■□□□□ 0.11
RETP07949 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RETP07949 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 AL512652.2-201ENST00000625156 1716 ntBASIC15.74■□□□□ 0.11
RETP07949 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RETP07949 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.74■□□□□ 0.11
RETP07949 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.73■□□□□ 0.11
RETP07949 AC092384.3-202ENST00000564646 2873 ntBASIC15.73■□□□□ 0.11
RETP07949 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RETP07949 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RETP07949 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RETP07949 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.73■□□□□ 0.11
RETP07949 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RETP07949 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RETP07949 AC006449.6-201ENST00000612330 2296 ntBASIC15.73■□□□□ 0.11
RETP07949 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 GPAA1P2-202ENST00000606848 1787 ntBASIC15.73■□□□□ 0.11
RETP07949 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RETP07949 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
RETP07949 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.73■□□□□ 0.11
RETP07949 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.73■□□□□ 0.11
RETP07949 AC093433.1-201ENST00000458048 571 ntBASIC15.73■□□□□ 0.11
RETP07949 SCARNA20.5-201ENST00000516991 142 ntBASIC15.73■□□□□ 0.11
RETP07949 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.73■□□□□ 0.11
RETP07949 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.73■□□□□ 0.11
RETP07949 AL049840.4-201ENST00000602422 811 ntBASIC15.73■□□□□ 0.11
RETP07949 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.73■□□□□ 0.11
RETP07949 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.73■□□□□ 0.11
RETP07949 AL008638.5-201ENST00000623814 1298 ntBASIC15.73■□□□□ 0.11
RETP07949 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.73■□□□□ 0.11
RETP07949 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.73■□□□□ 0.11
RETP07949 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.73■□□□□ 0.11
RETP07949 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RETP07949 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.73■□□□□ 0.11
RETP07949 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
RETP07949 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms