Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
GAPDHP04406 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GAPDHP04406 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.15□□□□□ -0.3
GAPDHP04406 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.15□□□□□ -0.3
GAPDHP04406 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GAPDHP04406 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.15□□□□□ -0.3
GAPDHP04406 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAPDHP04406 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAPDHP04406 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.15□□□□□ -0.3
GAPDHP04406 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.15□□□□□ -0.3
GAPDHP04406 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.15□□□□□ -0.3
GAPDHP04406 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAPDHP04406 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GAPDHP04406 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.15□□□□□ -0.3
GAPDHP04406 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.15□□□□□ -0.3
GAPDHP04406 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GAPDHP04406 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GAPDHP04406 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
GAPDHP04406 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GAPDHP04406 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 C18orf15-201ENST00000623680 2534 ntBASIC13.14□□□□□ -0.31
GAPDHP04406 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GAPDHP04406 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.14□□□□□ -0.31
GAPDHP04406 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.14□□□□□ -0.31
GAPDHP04406 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.14□□□□□ -0.31
GAPDHP04406 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 AC254562.1-201ENST00000417586 456 ntBASIC13.14□□□□□ -0.31
GAPDHP04406 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.14□□□□□ -0.31
GAPDHP04406 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.14□□□□□ -0.31
GAPDHP04406 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.14□□□□□ -0.31
GAPDHP04406 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.14□□□□□ -0.31
GAPDHP04406 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.14□□□□□ -0.31
GAPDHP04406 SLC25A39P2-201ENST00000537614 270 ntBASIC13.14□□□□□ -0.31
GAPDHP04406 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.14□□□□□ -0.31
GAPDHP04406 SNHG9-202ENST00000564014 471 ntBASIC13.14□□□□□ -0.31
GAPDHP04406 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.14□□□□□ -0.31
GAPDHP04406 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.14□□□□□ -0.31
GAPDHP04406 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.14□□□□□ -0.31
GAPDHP04406 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.14□□□□□ -0.31
GAPDHP04406 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.14□□□□□ -0.31
GAPDHP04406 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.14□□□□□ -0.31
GAPDHP04406 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 AC007326.2-201ENST00000624224 7579 ntBASIC13.14□□□□□ -0.31
GAPDHP04406 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
GAPDHP04406 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
GAPDHP04406 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.14□□□□□ -0.31
GAPDHP04406 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.14□□□□□ -0.31
GAPDHP04406 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.14□□□□□ -0.31
GAPDHP04406 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GAPDHP04406 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAPDHP04406 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
GAPDHP04406 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.13□□□□□ -0.31
GAPDHP04406 FOXO1B-201ENST00000504678 1527 ntBASIC13.13□□□□□ -0.31
GAPDHP04406 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.13□□□□□ -0.31
GAPDHP04406 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
GAPDHP04406 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.13□□□□□ -0.31
GAPDHP04406 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.13□□□□□ -0.31
GAPDHP04406 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
GAPDHP04406 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
GAPDHP04406 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAPDHP04406 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.13□□□□□ -0.31
GAPDHP04406 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.13□□□□□ -0.31
GAPDHP04406 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms