Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.95□□□□□ -0.18
CNOT4O95628 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 ARSEP1-201ENST00000420443 635 ntBASIC13.95□□□□□ -0.18
CNOT4O95628 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 SLED1-202ENST00000512051 380 ntBASIC13.95□□□□□ -0.18
CNOT4O95628 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT4O95628 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.95□□□□□ -0.18
CNOT4O95628 AC055876.2-201ENST00000531834 546 ntBASIC13.95□□□□□ -0.18
CNOT4O95628 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.95□□□□□ -0.18
CNOT4O95628 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.95□□□□□ -0.18
CNOT4O95628 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CNOT4O95628 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT4O95628 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT4O95628 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT4O95628 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.94□□□□□ -0.18
CNOT4O95628 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 SPDYE19P-201ENST00000338590 713 ntBASIC13.94□□□□□ -0.18
CNOT4O95628 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CNOT4O95628 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.94□□□□□ -0.18
CNOT4O95628 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.94□□□□□ -0.18
CNOT4O95628 CDC14C-201ENST00000428251 1719 ntBASIC13.94□□□□□ -0.18
CNOT4O95628 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.94□□□□□ -0.18
CNOT4O95628 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 TPRX2P-201ENST00000535362 881 ntBASIC13.94□□□□□ -0.18
CNOT4O95628 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.94□□□□□ -0.18
CNOT4O95628 TP53TG3HP-202ENST00000569755 579 ntBASIC13.94□□□□□ -0.18
CNOT4O95628 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.94□□□□□ -0.18
CNOT4O95628 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.94□□□□□ -0.18
CNOT4O95628 AC097359.3-201ENST00000603982 1210 ntBASIC13.94□□□□□ -0.18
CNOT4O95628 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.94□□□□□ -0.18
CNOT4O95628 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.94□□□□□ -0.18
CNOT4O95628 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
CNOT4O95628 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 LINC02447-202ENST00000501888 2146 ntBASIC13.94□□□□□ -0.18
CNOT4O95628 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.94□□□□□ -0.18
CNOT4O95628 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT4O95628 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 PCDHA3-202ENST00000532566 4594 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 AC138969.3-201ENST00000546612 1459 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 AC138932.2-201ENST00000548268 1459 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 AC126755.4-201ENST00000549796 1459 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 AC007541.1-201ENST00000570282 1469 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CNOT4O95628 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.93□□□□□ -0.18
CNOT4O95628 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 PAUPAR-201ENST00000630360 2965 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms