Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3DO95025 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.02■□□□□ -0
SEMA3DO95025 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEMA3DO95025 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.02■□□□□ -0
SEMA3DO95025 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.02■□□□□ -0
SEMA3DO95025 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SEMA3DO95025 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3DO95025 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3DO95025 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SEMA3DO95025 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3DO95025 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3DO95025 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.02■□□□□ -0
SEMA3DO95025 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.02■□□□□ -0
SEMA3DO95025 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.02■□□□□ -0
SEMA3DO95025 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3DO95025 RN7SL618P-201ENST00000477850 296 ntBASIC15.02■□□□□ -0
SEMA3DO95025 SLED1-202ENST00000512051 380 ntBASIC15.02■□□□□ -0
SEMA3DO95025 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.02■□□□□ -0
SEMA3DO95025 AC069120.2-201ENST00000524091 540 ntBASIC15.02■□□□□ -0
SEMA3DO95025 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.02■□□□□ -0
SEMA3DO95025 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SEMA3DO95025 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.02■□□□□ -0
SEMA3DO95025 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.02■□□□□ -0
SEMA3DO95025 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.02■□□□□ -0
SEMA3DO95025 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.02□□□□□ -0.01
SEMA3DO95025 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.02□□□□□ -0.01
SEMA3DO95025 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.02□□□□□ -0.01
SEMA3DO95025 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3DO95025 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.02□□□□□ -0.01
SEMA3DO95025 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.02□□□□□ -0.01
SEMA3DO95025 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SEMA3DO95025 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3DO95025 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.02□□□□□ -0.01
SEMA3DO95025 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3DO95025 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3DO95025 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3DO95025 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.01□□□□□ -0.01
SEMA3DO95025 AL009178.2-201ENST00000597278 2719 ntBASIC15.01□□□□□ -0.01
SEMA3DO95025 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SEMA3DO95025 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 AC009090.5-201ENST00000624886 2285 ntBASIC15.01□□□□□ -0.01
SEMA3DO95025 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.01□□□□□ -0.01
SEMA3DO95025 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 AC013268.4-201ENST00000637413 2228 ntBASIC15.01□□□□□ -0.01
SEMA3DO95025 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SEMA3DO95025 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.01□□□□□ -0.01
SEMA3DO95025 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 FAM86GP-201ENST00000448322 971 ntBASIC15.01□□□□□ -0.01
SEMA3DO95025 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.01□□□□□ -0.01
SEMA3DO95025 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.01□□□□□ -0.01
SEMA3DO95025 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.01□□□□□ -0.01
SEMA3DO95025 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.01□□□□□ -0.01
SEMA3DO95025 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.01□□□□□ -0.01
SEMA3DO95025 AL158211.3-201ENST00000607385 239 ntBASIC15.01□□□□□ -0.01
SEMA3DO95025 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.01□□□□□ -0.01
SEMA3DO95025 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.01□□□□□ -0.01
SEMA3DO95025 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3DO95025 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3DO95025 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SEMA3DO95025 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SEMA3DO95025 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15□□□□□ -0.01
SEMA3DO95025 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15□□□□□ -0.01
SEMA3DO95025 API5-202ENST00000420461 2009 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms