Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.73■□□□□ 0.11
GPC4O75487 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
GPC4O75487 CICP13-201ENST00000422015 2789 ntBASIC15.73■□□□□ 0.11
GPC4O75487 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.73■□□□□ 0.11
GPC4O75487 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 METTL21AP1-201ENST00000438852 635 ntBASIC15.73■□□□□ 0.11
GPC4O75487 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.73■□□□□ 0.11
GPC4O75487 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
GPC4O75487 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
GPC4O75487 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
GPC4O75487 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 C8orf49-201ENST00000525043 1968 ntBASIC15.73■□□□□ 0.11
GPC4O75487 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.72■□□□□ 0.11
GPC4O75487 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.72■□□□□ 0.11
GPC4O75487 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GPC4O75487 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.72■□□□□ 0.11
GPC4O75487 KRT8P37-201ENST00000451609 1420 ntBASIC15.72■□□□□ 0.11
GPC4O75487 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GPC4O75487 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 AC092183.1-201ENST00000469884 875 ntBASIC15.72■□□□□ 0.11
GPC4O75487 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.72■□□□□ 0.11
GPC4O75487 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GPC4O75487 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.72■□□□□ 0.11
GPC4O75487 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
GPC4O75487 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
GPC4O75487 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GPC4O75487 AC006486.2-201ENST00000624246 2199 ntBASIC15.72■□□□□ 0.11
GPC4O75487 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GPC4O75487 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
GPC4O75487 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
GPC4O75487 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
GPC4O75487 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.71■□□□□ 0.11
GPC4O75487 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
GPC4O75487 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms