Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.23□□□□□ -0.29
PDCD6O75340 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PDCD6O75340 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 FGD5P1-202ENST00000614866 2498 ntBASIC13.22□□□□□ -0.29
PDCD6O75340 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
PDCD6O75340 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 AL009178.2-201ENST00000597278 2719 ntBASIC13.22□□□□□ -0.29
PDCD6O75340 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
PDCD6O75340 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
PDCD6O75340 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.22□□□□□ -0.29
PDCD6O75340 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 FO393414.2-201ENST00000405153 598 ntBASIC13.22□□□□□ -0.29
PDCD6O75340 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.22□□□□□ -0.29
PDCD6O75340 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.22□□□□□ -0.29
PDCD6O75340 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.22□□□□□ -0.29
PDCD6O75340 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.22□□□□□ -0.29
PDCD6O75340 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.22□□□□□ -0.29
PDCD6O75340 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 AC105021.1-202ENST00000570572 669 ntBASIC13.22□□□□□ -0.29
PDCD6O75340 MTDHP5-201ENST00000598980 586 ntBASIC13.22□□□□□ -0.29
PDCD6O75340 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PDCD6O75340 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PDCD6O75340 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PDCD6O75340 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.22□□□□□ -0.29
PDCD6O75340 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.22□□□□□ -0.29
PDCD6O75340 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PDCD6O75340 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
PDCD6O75340 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PDCD6O75340 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 AC084364.1-201ENST00000551967 1556 ntBASIC13.21□□□□□ -0.29
PDCD6O75340 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PDCD6O75340 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.21□□□□□ -0.29
PDCD6O75340 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.21□□□□□ -0.29
PDCD6O75340 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PDCD6O75340 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
PDCD6O75340 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.21□□□□□ -0.29
PDCD6O75340 AC005237.2-201ENST00000434368 219 ntBASIC13.21□□□□□ -0.29
PDCD6O75340 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.21□□□□□ -0.29
PDCD6O75340 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
PDCD6O75340 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
PDCD6O75340 KRT18P58-201ENST00000527480 1120 ntBASIC13.21□□□□□ -0.29
PDCD6O75340 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 ALG1L8P-201ENST00000533887 760 ntBASIC13.21□□□□□ -0.29
PDCD6O75340 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.21□□□□□ -0.29
PDCD6O75340 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.21□□□□□ -0.29
PDCD6O75340 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms