Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPHP4O75161 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NPHP4O75161 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NPHP4O75161 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPHP4O75161 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC21.38■■□□□ 1.01
NPHP4O75161 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.38■■□□□ 1.01
NPHP4O75161 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPHP4O75161 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC21.38■■□□□ 1.01
NPHP4O75161 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC21.38■■□□□ 1.01
NPHP4O75161 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.38■■□□□ 1.01
NPHP4O75161 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
NPHP4O75161 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.38■■□□□ 1.01
NPHP4O75161 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.37■■□□□ 1.01
NPHP4O75161 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
NPHP4O75161 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.37■■□□□ 1.01
NPHP4O75161 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NPHP4O75161 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.37■■□□□ 1.01
NPHP4O75161 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.37■■□□□ 1.01
NPHP4O75161 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 AC136759.1-202ENST00000530858 2194 ntBASIC21.37■■□□□ 1.01
NPHP4O75161 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 POLD4-208ENST00000532830 904 ntTSL 3 BASIC21.37■■□□□ 1.01
NPHP4O75161 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPHP4O75161 AC012158.2-201ENST00000536546 354 ntBASIC21.37■■□□□ 1.01
NPHP4O75161 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC21.37■■□□□ 1.01
NPHP4O75161 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.37■■□□□ 1.01
NPHP4O75161 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC21.37■■□□□ 1.01
NPHP4O75161 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC21.37■■□□□ 1.01
NPHP4O75161 AC087392.5-201ENST00000612517 489 ntBASIC21.37■■□□□ 1.01
NPHP4O75161 MIR6769A-201ENST00000617340 73 ntBASIC21.37■■□□□ 1.01
NPHP4O75161 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
NPHP4O75161 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 AC026471.1-201ENST00000564629 3026 ntBASIC21.36■■□□□ 1.01
NPHP4O75161 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC21.36■■□□□ 1.01
NPHP4O75161 DGAT2L7P-201ENST00000602462 744 ntBASIC21.36■■□□□ 1.01
NPHP4O75161 LINC01783-202ENST00000614408 828 ntBASIC21.36■■□□□ 1.01
NPHP4O75161 BX284668.2-205ENST00000619677 828 ntBASIC21.36■■□□□ 1.01
NPHP4O75161 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHP4O75161 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.36■■□□□ 1.01
NPHP4O75161 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC21.36■■□□□ 1.01
NPHP4O75161 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.35■■□□□ 1.01
NPHP4O75161 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHP4O75161 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHP4O75161 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHP4O75161 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHP4O75161 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
NPHP4O75161 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHP4O75161 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPHP4O75161 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.35■■□□□ 1.01
NPHP4O75161 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.35■■□□□ 1.01
NPHP4O75161 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NPHP4O75161 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC21.35■■□□□ 1.01
NPHP4O75161 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPHP4O75161 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC21.35■■□□□ 1.01
NPHP4O75161 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC21.35■■□□□ 1.01
NPHP4O75161 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
NPHP4O75161 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPHP4O75161 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NPHP4O75161 LINC00431-202ENST00000636375 159 ntBASIC21.35■■□□□ 1.01
NPHP4O75161 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC21.35■■□□□ 1.01
NPHP4O75161 AP001094.4-201ENST00000579008 2176 ntBASIC21.35■■□□□ 1.01
NPHP4O75161 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
NPHP4O75161 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NPHP4O75161 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21.35■■□□□ 1.01
NPHP4O75161 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHP4O75161 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPHP4O75161 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHP4O75161 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC21.34■■□□□ 1.01
NPHP4O75161 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHP4O75161 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC21.34■■□□□ 1.01
NPHP4O75161 AC018695.7-201ENST00000624587 2492 ntBASIC21.34■■□□□ 1.01
NPHP4O75161 Z69890.1-201ENST00000382990 339 ntBASIC21.34■■□□□ 1.01
NPHP4O75161 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms