Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 AC074338.1-201ENST00000416825 156 ntBASIC15.51■□□□□ 0.07
PCDHGA12O60330 SOCS2P1-201ENST00000417727 557 ntBASIC15.51■□□□□ 0.07
PCDHGA12O60330 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 AC134915.1-201ENST00000426461 574 ntBASIC15.51■□□□□ 0.07
PCDHGA12O60330 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 TARDBPP1-201ENST00000442013 1203 ntBASIC15.51■□□□□ 0.07
PCDHGA12O60330 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 AC068587.3-201ENST00000526613 355 ntBASIC15.51■□□□□ 0.07
PCDHGA12O60330 AP000812.2-201ENST00000538934 718 ntBASIC15.51■□□□□ 0.07
PCDHGA12O60330 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 INTS4P2-202ENST00000614726 2019 ntBASIC15.5■□□□□ 0.07
PCDHGA12O60330 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 BRWD1P1-201ENST00000401091 371 ntBASIC15.5■□□□□ 0.07
PCDHGA12O60330 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 BCRP2-202ENST00000447763 634 ntBASIC15.5■□□□□ 0.07
PCDHGA12O60330 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 BCRP6-201ENST00000510112 632 ntBASIC15.5■□□□□ 0.07
PCDHGA12O60330 BCRP7-201ENST00000511549 544 ntBASIC15.5■□□□□ 0.07
PCDHGA12O60330 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AP001889.1-201ENST00000525414 633 ntBASIC15.5■□□□□ 0.07
PCDHGA12O60330 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC009486.1-201ENST00000569860 813 ntBASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC124283.3-201ENST00000570869 594 ntBASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA12O60330 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA12O60330 AC126177.1-201ENST00000547829 2218 ntBASIC15.49■□□□□ 0.07
PCDHGA12O60330 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 AC020907.1-201ENST00000616460 1350 ntBASIC15.49■□□□□ 0.07
PCDHGA12O60330 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms