Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC097493.4-201ENST00000641197 219 ntBASIC12.16□□□□□ -0.46
PDE6DO43924 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
PDE6DO43924 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.16□□□□□ -0.46
PDE6DO43924 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.15□□□□□ -0.46
PDE6DO43924 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PDE6DO43924 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PDE6DO43924 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
PDE6DO43924 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 AC152010.1-201ENST00000415779 2006 ntBASIC12.15□□□□□ -0.46
PDE6DO43924 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.15□□□□□ -0.46
PDE6DO43924 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
PDE6DO43924 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.15□□□□□ -0.46
PDE6DO43924 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.15□□□□□ -0.46
PDE6DO43924 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PDE6DO43924 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.15□□□□□ -0.46
PDE6DO43924 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.15□□□□□ -0.46
PDE6DO43924 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.15□□□□□ -0.46
PDE6DO43924 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.15□□□□□ -0.46
PDE6DO43924 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PDE6DO43924 MIR5100-201ENST00000579544 119 ntBASIC12.15□□□□□ -0.46
PDE6DO43924 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PDE6DO43924 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.15□□□□□ -0.46
PDE6DO43924 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.15□□□□□ -0.46
PDE6DO43924 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PDE6DO43924 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.15□□□□□ -0.46
PDE6DO43924 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.15□□□□□ -0.46
PDE6DO43924 AL589702.1-201ENST00000641229 1509 ntBASIC12.15□□□□□ -0.46
PDE6DO43924 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
PDE6DO43924 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 AC018892.3-201ENST00000623986 2499 ntBASIC12.15□□□□□ -0.46
PDE6DO43924 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PDE6DO43924 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PDE6DO43924 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
PDE6DO43924 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PDE6DO43924 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
PDE6DO43924 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.15□□□□□ -0.47
PDE6DO43924 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.15□□□□□ -0.47
PDE6DO43924 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.15□□□□□ -0.47
PDE6DO43924 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.15□□□□□ -0.47
PDE6DO43924 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PDE6DO43924 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PDE6DO43924 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 AC107918.4-201ENST00000641966 3141 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms